Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850325.1_cds_XP_016511118.1_23890
CDS Infomation

[gene=LOC107828343] [db_xref=GeneID:107828343] [protein=transmembrane 9 superfamily member 9-like] [protein_id=XP_016511118.1] [location=join(77660..77773,81791..81955,82044..82153,82255..82363,82461..82573,82709..82859,83027..84184)] [gbkey=CDS]
Sequence

ATGGGAAGAGCAGCTCGTAGATCTCTTCTGATTTGCGCCATTTCTCTTCTTCTTACCTTC
CACAATGCTTTCTCTTTCTATCTCCCCGGTGTCGCTCCTGAAGATTTCCAAAAGGGAGAT
CCTCTGTCTGTGAAAGTGAACAAGCTGACTTCTACAAAGACTCAGCTTCCTTACTCGTTC
TACTCTGTTCCTTTCTGTCGTCCAAAAAATATAGTGGATAGCAGAGAAAATCTTGGAGAA
GTGCTTCGTGGTGATCGAATTGAGAACTCCCCTTATACGTTCAAAATGAGGGAACCAGAG
ATGTGCCATGTTGTTTGTAGGCTTGTACTTGATGACAAGACTGCTAAGGAATTTAAAGAA
AAAATTGAAGATGAATATCGTGTCAACATGATCCTAGATAATCTGCCTTTAGTTGTTCCA
GTTCGGAGGTTAGAGCAAGAAGCCCCTCCTGCCTATCAACAGGGAGTTTATATCGGTGTA
AAAGGACAATATGCTGGGAGCAAGGATGAGAAGCATTTCATCCATAACCACTTGACATTC
ACTGTTAAGTACCATAAAGATTTGCAGACAGATTCAGCCAGAATTGTGGGATTTGAAGTC
ATGCCATTCAGTGTTAAGCATGAATATGATGGAAAATGGACTGAAAATACTCGTTTAACA
ACATGTGATCCACATGCAAAGCGGACTGTATCTAATTCAAATTCTCCTCAAGAGGTTGAG
ACTAACCAAGAAATCATATTTACATATGATGTTGAATTCCAGGAGAGTGATGTCAAGTGG
GCGTCGAGATGGGACGCCTATCTTCTGATGGCTGATGATCAGATCCATTGGTTCTCGATA
GTAAATTCTTTAATGATTGTGCTTTTCCTATCAGGCATGGTGGCGATGATAATGCTGAGA
ACACTTTATCGCGATATTTCCAAGTACAATGAACTGGAGACCCAGGAGGAGGCACAAGAA
GAAACTGGATGGAAACTAGTCCACGCAGATGTTTTCAGGCCTCCAAGTAACTCAGATTTG
CTTTGTGTCTATGTTGGAACTGGTGTACAGTTTGTCGGTATGATGGTGGTGACCATGATG
TTTGCTGTCCTTGGGTTCCTCTCCCCTTCGAATCGGGGTGGGCTAATGACCGCTATGCTC
TTGCTCTGGGTTTTCATGGGACTCTTTGCGGGCTACTCTGCTTCCCGTCTCTATAAGTTA
TTTAAAGGTACAGAATGGAAGAGAATTGCTCTCAGGACAGCTTTTCTGTTTCCAGCTACT
GTCTTTGCCATCTTCTTCGTTCTAAATGCACTCATCTGGGGTCAAAAATCATCTGGGGCT
GTGCCATTCGGAACAATGTTTGCGTTGGTGTTCTTATGGTTCGGAATTTCAGTCCCTCTT
GTGTTTGTGGGCAGTTATGTTGGTTTTAGAAAGCCAGCCATTGAGGATCCTGTGAAGACG
AATAAAATACCCAGGCAGATCCCGGAGCAGGCTTGGTACATGAACCCCATCTTCTCAGTC
CTAATCGGAGGCATACTTCCATTTGGAGCTGTTTTCATTGAGCTCTTTTTCATTCTTACC
TCAATCTGGCTGAACCAATTTTACTACCTCTTCGGCTTCCTCTTCATCGTGTTTGTCATT
CTGATTGTCACCTGTGCCGAGATAACTATCGTACTATGCTATTTCCAGTTATGCAGCGAG
GACTACTTGTGGTGGTGGAGATCCTACCTGACATCAGGCTCGTCCGCACTTTACCTCTTC
CTTTATGCTACCTTCTACTTCTTCACTAAGCTTGACATCACTAAGCCTGTTTCTGGGATC
TTGTACTTTGGTTACATGTTGATTGCTTCATATGCATTTTTCGTTCTGACCGGTACCATC
GGTTTCTATGCATGCTTCTGGTTCACAAGACTTATTTACTCGTCTGTGAAGATCGACTGA

Peptide Sequence

PEP ID

XP_016511118.1
PEP Infomation

PREDICTED: transmembrane 9 superfamily member 9-like [Nicotiana tabacum]
Sequence

MGRAARRSLLICAISLLLTFHNAFSFYLPGVAPEDFQKGDPLSVKVNKLTSTKTQLPYSF
YSVPFCRPKNIVDSRENLGEVLRGDRIENSPYTFKMREPEMCHVVCRLVLDDKTAKEFKE
KIEDEYRVNMILDNLPLVVPVRRLEQEAPPAYQQGVYIGVKGQYAGSKDEKHFIHNHLTF
TVKYHKDLQTDSARIVGFEVMPFSVKHEYDGKWTENTRLTTCDPHAKRTVSNSNSPQEVE
TNQEIIFTYDVEFQESDVKWASRWDAYLLMADDQIHWFSIVNSLMIVLFLSGMVAMIMLR
TLYRDISKYNELETQEEAQEETGWKLVHADVFRPPSNSDLLCVYVGTGVQFVGMMVVTMM
FAVLGFLSPSNRGGLMTAMLLLWVFMGLFAGYSASRLYKLFKGTEWKRIALRTAFLFPAT
VFAIFFVLNALIWGQKSSGAVPFGTMFALVFLWFGISVPLVFVGSYVGFRKPAIEDPVKT
NKIPRQIPEQAWYMNPIFSVLIGGILPFGAVFIELFFILTSIWLNQFYYLFGFLFIVFVI
LIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLDITKPVSGI
LYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID

Transcript Sequence

Gene sequence data has not been registered.